Shopify sellers

The best Shopify bookkeeping services for online stores

Get your books handled by Shopify bookkeepers who will understand your business and the nuances of selling through Shopify.

Trusted by Shopify stores worldwide

6 Figure Brand

"Perfect communication the whole way through set up. Their monthly reports are exactly what I need to run my company - it's amazing!"
Ronan Walsh
Digital Trawler

7 Figure Brand

"The EcomBalance team is accessible when we have questions and they got us caught up on 6 months of bookkeeping exactly as promised. "
Spencer Carlson
Ballard Products

8 Figure Brand

"We struggled to find bookkeepers that truly understood our business. EcomBalance has been all of that and much more. Best in the business."
Neils Olson
Trio Beauty

Selling on Shopify is unique...

That’s why you need a Shopify bookkeeping service that understands how selling through Shopify works. Accounting for platform fees, sales tax, and revenue is critical to knowing your numbers and growing your Shopify sales. We handle it all for you.

Why Shopify stores choose us

Shopify expertise

Our Shopify bookkeeping services are top notch! All of our Shopify bookkeepers in-house have years of experience handling finances for eCommerce stores.

Simple, process-driven, and reliable

We're process people that like to keep things simple. We'll set your Shopify bookkeeping up so that they are powered by proven processes.

Fast support and proactive

Work with a dedicated team of Shopify bookkeepers that provide fast communication and proactive insights into improving your financials.

Commitment for the long run

We work hard to be proactive for you and your Shopify bookkeeping. We want to create a long term relationship where you know your books are in good hands.

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Starts at $399/month

Monthly Shopify bookkeeping

We get all of your Shopify sales, fees, and other transactions integrated into Quickbooks Online or Xero using A2X so that it's plug and play, no matter where your current books are at.

By the 15th of every month, we'll send your Shopify Profit and Loss, Balance Sheet, and Cash Flow Statement so you can make smart decisions while growing your Shopify store.

One time upfront cost

Clean Up and Catch Up

We can help you get your Shopify bookkeeping up to date for an amazing price. Get in touch with us and we'll provide you a custom quote for our Clean Up and Catch Up service. Once they're up to date, we'll take over from there and keep them perfect for you!

Hey Shopify sellers!

Want a Shopify bookkeeping service that fully understands your Shopify store? We’re here for you!

You wouldn’t have someone that doesn't know about eCommerce create your product listings, would you? So, shouldn’t your bookkeeper know Shopify and eCommerce as well?

Monthly financial statements

We provide you with a detailed Profit and Loss, Balance Sheet, and Cash Flow statement by the 14th of every month.

Tax filing and preparation

We prepare all of your monthly reports so that they are 100% tax compliant and ready for year end taxes.

CFO services

Planning to sell? Or just want strategic financial advice? Work directly with our Shopify bookkeepers for monthly advice.

Catch Up services

Behind on your Shopify bookkeeping? No worries! We'll get you caught up in no time for a reasonable price.

Inventory bookkeeping

We keep your inventory records up to date multiple times throughout the year so you can see how much you have in inventory.

Shopify fees

We understand selling on Shopify -- and how to properly classify their fees so you know your numbers accurately.

Sales tax

We work with you to understand the sales tax obligations you have selling in different states and countries through Shopify.

Custom Shopify solutions

Have other Shopify bookkeeping service needs? Sign up and set up a call to chat with us about your unique needs.

Frequently Asked Questions

First and foremost, we’re eCommerce bookkeeping experts. We cater to eCommerce businesses specifically selling on Amazon, Shopify, Ebay, Etsy, Walmart, etc. Second, we truly care about the success of our customers and we go above and beyond to develop strong relationships with all of our customers. No customer is just a number with us. From the start, we invest the time to get to know your eCommerce business so we can handle your books properly. Then we ensure you have a strong relationship with your eCommerce Bookkeeping team and can reach them at any time with questions and concerns. Finally, we look to be proactive finding opportunities for our customers to save on expenses, capitalize on market opportunities, and grow as smart as possible. We’re all about the customer experience and work tirelessly to make sure our customers are happy with us as their bookkeeping partner.

We take the time to get to know your Shopify business, balance the books, then provide you with monthly reports. On both plans, we provide you with a monthly Profit and Loss Statement, Balance Sheet, and Cash Flow Statement. We also offer eCommerce (Amazon, Shopify, Ebay, etc.) specific product sales reports, employee payroll reports, AP & AR management, paying invoices, running payroll, yearly tax filing, and much more. If there’s a service specific to Shopify that you need that’s not on this page, simply get started and speak with us about it. 

For eCommerce businesses, sales and COGS are reported on an accrual basis. Link My Books (the tool we use to connect with eCommerce marketplaces and processors) imports all sales and COGS data under accrual basis accounting.


We don’t offer a service to accrue expenses and other accounts since that would cost significantly more time and money (and is unnecessary for most businesses).


If you are not an eCommerce business, our sister company AccountsBalance does bookkeeping on a cash basis.

We require the following for getting started: 

  • Electronic transaction and expense access (i.e. access to your selling channels, banks, credit cards, etc.)
  • No commingling of personal expenses
  • A 100% moral business — we don’t work with businesses that aren’t moral.

During your first month, you won’t be charged and we’ll complete the bookkeeping of your previous completed month in business. We’ll show you why working with us is high level and you’ll be able to meet your dedicated eCommerce Bookkeeping team.

Get in touch

Speak with us

Still have questions? Schedule a call with one of our founders, Nathan Hirsch and Connor Gillivan, to learn more about EcomBalance and how it can help your Shopify business.

Work with Shopify bookkeeping experts!

See what it's like running your Shopify business with expert Shopify bookkeepers on your side. Try us for free -- we'll do your most recent's months books so you can see what it's like working with us.

Exclusive finance guide

Want better bookkeeping?

It's possible! Subscribe below & we'll send you our Bookkeeping Packet. A pack of resources to teach you about bookkeeping.

You’ll get our Ecommerce Bookkeeping Guide, The 10 Ecommerce Bookkeeping Mistakes Ebook, our Monthly Finance Meeting Agenda, & a few surprises!